STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23515.1N-acyl-D-amino-acid deacylase. (507 aa)    
Predicted Functional Partners:
EFL23514.1
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
 
     0.852
EFL23513.1
Asparaginase.
       0.762
EFL23516.1
LigA protein.
 
     0.637
EFL28862.1
Putative peptidase dimerization domain protein.
 
  
 0.618
EFL25685.1
beta-N-acetylhexosaminidase.
 
  
  0.587
EFL25922.1
beta-N-acetylhexosaminidase.
 
  
  0.583
EFL29233.1
M20/M25/M40 family peptidase.
 
  
 0.561
EFL20593.1
Glycosyl hydrolase family 20, catalytic domain protein.
    
  0.524
EFL25352.1
Putative beta-N-Acetylglucosaminidase; Truncated CDS.
    
  0.524
EFL23012.1
MlrC C-terminus superfamily protein.
 
     0.469
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.