STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23525.1Putative secreted protein. (180 aa)    
Predicted Functional Partners:
EFL23526.1
Fructose-1,6-bisphosphatase, class II.
     
 0.832
EFL25678.1
Conserved hypothetical protein; Belongs to the UPF0301 (AlgH) family.
  
    0.704
EFL27196.1
SPFH domain/Band 7 family protein.
   
    0.645
EFL27260.1
SPFH/Band 7 domain protein; Truncated CDS; unextendable partial coding region.
   
    0.645
EFL22929.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.580
EFL26775.1
Transcription regulator.
  
     0.575
EFL26776.1
Conserved hypothetical protein.
  
     0.545
EFL26878.1
Putative membrane protein.
  
     0.542
EFL28321.1
Putative membrane protein.
  
     0.534
EFL26640.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.514
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.