STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23529.1Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (547 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.998
EFL23496.1
Ferredoxin, 2Fe-2S.
  
 
 0.995
EFL25347.1
Succinate dehydrogenase, iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.995
EFL26054.1
Fumarate reductase, iron-sulfur protein.
  
 
 0.995
EFL25350.1
Succinate dehydrogenase, cytochrome b556 subunit.
  
 
 0.994
EFL26055.1
Fumarate reductase, flavoprotein subunit.
  
 
 0.994
EFL25238.1
Citrate (Si)-synthase; Belongs to the citrate synthase family.
  
 
 0.990
EFL25349.1
Succinate dehydrogenase, hydrophobic membrane anchor protein.
  
 
 0.990
EFL25995.1
Citrate (Si)-synthase; Belongs to the citrate synthase family.
  
 
 0.990
EFL23495.1
Putative FAD flavoprotein oxidase.
  
 
 0.989
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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