STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23531.1Putative glycosyl hydrolase family protein. (375 aa)    
Predicted Functional Partners:
EFL21738.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
 
  
  0.835
EFL25884.1
Chitinase domain protein.
  
  
 
0.710
EFL23343.1
Putative sugar hydrolase.
     
 0.668
EFL23344.1
Putative sugar hydrolase; Unextendable partial coding region.
     
 0.668
EFL25949.1
Putative beta-N-Acetylglucosaminidase.
     
 0.668
EFL23565.1
Putative chitinase A; Belongs to the glycosyl hydrolase 18 family.
  
  
  0.663
EFL23532.1
Translation initiation factor IF-2.
 
     0.648
EFL26727.1
Pullulanase (Alpha-dextrin endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase).
  
 
 0.644
EFL20593.1
Glycosyl hydrolase family 20, catalytic domain protein.
     
 0.639
EFL25352.1
Putative beta-N-Acetylglucosaminidase; Truncated CDS.
     
 0.639
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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