STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23532.1Translation initiation factor IF-2. (287 aa)    
Predicted Functional Partners:
EFL23533.1
Glycosyl transferase, group 2 family protein/polysaccharide deacetylase.
 
     0.830
EFL23069.1
Putative calcium-binding protein.
  
     0.657
EFL23531.1
Putative glycosyl hydrolase family protein.
 
     0.648
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.631
EFL22400.1
Collagen alpha-1(III) chain.
  
     0.605
EFL22082.1
Truncated CDS; proline-rich protein HaeIII subfamily 1 (Proline-richprotein MP-2); unextendable partial coding region.
  
     0.577
EFL24829.1
Putative serine/arginine repetitive matrix protein 1.
  
     0.543
EFL23530.1
Riboflavin biosynthesis protein RibF; Unextendable partial coding region.
 
     0.493
EFL22310.1
Putative secreted protein.
  
     0.492
EFL23882.1
Putative integral membrane protein.
  
     0.490
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.