Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23538.1Penicillin-binding protein. (747 aa)    
Predicted Functional Partners:
EFL26855.1
Penicillin binding protein transpeptidase domain protein.
 
 
0.878
EFL26141.1
Penicillin-binding protein 2.
 
 
 0.871
EFL24653.1
Penicillin binding protein transpeptidase domain protein.
 
 
0.818
EFL26134.1
Putative penicillin-binding protein.
 
 
0.815
EFL25790.1
Peptidoglycan glycosyltransferase.
 
 
0.812
EFL26868.1
Putative DivIVA domain protein.
   
 
 0.747
EFL26860.1
Cell division protein FtsW; Belongs to the SEDS family.
  
  
 0.740
EFL25061.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
     
 0.719
EFL25661.1
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
     
 0.712
EFL26142.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
  
 
 
 0.712
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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