STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23542.1Lipoprotein releasing system, ATP-binding protein LolD. (228 aa)    
Predicted Functional Partners:
EFL24456.1
Putative ABC transport system integral membrane protein.
  
 0.998
EFL23543.1
Putative integral membrane protein.
 
 
 0.968
EFL23541.1
Putative transcriptional regulator, PadR family.
 
     0.943
EFL23539.1
SPFH domain/Band 7 family protein.
     
 0.821
EFL23540.1
Conserved hypothetical protein.
       0.820
EFL28396.1
Putative ABC transporter integral membrane protein.
 
 0.815
EFL23680.1
ABC lipoprotein transporter, permease component.
 
 0.814
EFL21565.1
Efflux ABC transporter, permease.
  
 0.786
EFL21566.1
Efflux ABC transporter, permease.
  
 0.786
EFL21628.1
Putative ABC transporter integral membrane protein.
  
 0.783
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.