STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23543.1Putative integral membrane protein. (825 aa)    
Predicted Functional Partners:
EFL23541.1
Putative transcriptional regulator, PadR family.
 
   
 0.980
EFL23542.1
Lipoprotein releasing system, ATP-binding protein LolD.
 
 
 0.968
EFL23539.1
SPFH domain/Band 7 family protein.
       0.820
EFL23540.1
Conserved hypothetical protein.
       0.820
EFL26313.1
Putative two-component system sensor kinase; Truncated CDS.
  
    0.649
EFL26077.1
Putative membrane protein.
  
   
 0.531
EFL20343.1
Putative mucin-2 (MUC-2) (Intestinal mucin-2); truncated CDS; Belongs to the FPP/GGPP synthase family.
  
    0.509
EFL21200.1
Putative mucin-1 (MUC-1).
  
    0.496
EFL23538.1
Penicillin-binding protein.
     
 0.465
EFL21450.1
Putative regulatory protein; Truncated CDS; unextendable partial coding region.
  
     0.460
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.