Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL22809.1 | EFL23554.1 | SSOG_02523 | SSOG_03268 | Sensor histidine kinase/response regulator. | Conserved hypothetical protein. | 0.493 |
EFL22809.1 | hpf | SSOG_02523 | SSOG_05336 | Sensor histidine kinase/response regulator. | S30AE family protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.676 |
EFL23554.1 | EFL22809.1 | SSOG_03268 | SSOG_02523 | Conserved hypothetical protein. | Sensor histidine kinase/response regulator. | 0.493 |
EFL23554.1 | EFL23555.1 | SSOG_03268 | SSOG_03269 | Conserved hypothetical protein. | Putative membrane protein. | 0.818 |
EFL23554.1 | EFL25419.1 | SSOG_03268 | SSOG_05133 | Conserved hypothetical protein. | Pyrimidine-nucleoside phosphorylase. | 0.461 |
EFL23554.1 | hpf | SSOG_03268 | SSOG_05336 | Conserved hypothetical protein. | S30AE family protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.505 |
EFL23555.1 | EFL23554.1 | SSOG_03269 | SSOG_03268 | Putative membrane protein. | Conserved hypothetical protein. | 0.818 |
EFL25419.1 | EFL23554.1 | SSOG_05133 | SSOG_03268 | Pyrimidine-nucleoside phosphorylase. | Conserved hypothetical protein. | 0.461 |
hpf | EFL22809.1 | SSOG_05336 | SSOG_02523 | S30AE family protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Sensor histidine kinase/response regulator. | 0.676 |
hpf | EFL23554.1 | SSOG_05336 | SSOG_03268 | S30AE family protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Conserved hypothetical protein. | 0.505 |