Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL23559.1Putative integral membrane protein. (312 aa)    
Predicted Functional Partners:
EFL23562.1
Putative septum site-determining protein; Overlaps another CDS with the same product name.
 
 
 0.999
EFL23560.1
Type II/IV secretion system protein.
 
 
 0.998
EFL23558.1
Putative integral membrane protein.
 
 
0.997
EFL23563.1
Flp pilus assembly protein CpaB.
 
 
 0.997
EFL24949.1
Type II/IV secretion system protein.
 
 
 0.990
EFL23561.1
Putative septum site-determining protein; Overlaps another CDS with the same product name.
  
  
 0.963
EFL24950.1
Putative integral membrane protein.
     
  0.855
EFL24951.1
Putative integral membrane protein.
     
  0.855
EFL23759.1
Conserved hypothetical protein.
  
 
 0.816
EFL23564.1
Conserved hypothetical protein.
       0.806
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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