STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23559.1Putative integral membrane protein. (312 aa)    
Predicted Functional Partners:
EFL23562.1
Putative septum site-determining protein; Overlaps another CDS with the same product name.
 
  
 0.995
EFL23560.1
Type II/IV secretion system protein.
 
  
 0.990
EFL23558.1
Putative integral membrane protein.
 
  
0.988
EFL23563.1
Flp pilus assembly protein CpaB.
 
  
 0.984
EFL23561.1
Putative septum site-determining protein; Overlaps another CDS with the same product name.
  
  
 0.965
EFL24949.1
Type II/IV secretion system protein.
 
  
 0.926
EFL23564.1
Conserved hypothetical protein.
       0.825
EFL23557.1
Putative secreted protein.
       0.809
EFL23556.1
Putative secreted protein.
       0.780
EFL23565.1
Putative chitinase A; Belongs to the glycosyl hydrolase 18 family.
       0.711
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.