STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23560.1Type II/IV secretion system protein. (457 aa)    
Predicted Functional Partners:
EFL23558.1
Putative integral membrane protein.
 
  
 0.992
EFL23559.1
Putative integral membrane protein.
 
  
 0.990
EFL23562.1
Putative septum site-determining protein; Overlaps another CDS with the same product name.
 
  
 0.985
EFL23563.1
Flp pilus assembly protein CpaB.
 
  
 0.945
EFL23561.1
Putative septum site-determining protein; Overlaps another CDS with the same product name.
  
  
 0.944
EFL23564.1
Conserved hypothetical protein.
       0.825
EFL23557.1
Putative secreted protein.
       0.809
EFL23556.1
Putative secreted protein.
  
    0.782
EFL24950.1
Putative integral membrane protein.
  
  
 0.734
EFL24951.1
Putative integral membrane protein.
  
  
 0.734
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.