STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23571.1IclR family transcriptional regulator. (283 aa)    
Predicted Functional Partners:
EFL23570.1
Endoribonuclease L-PSP family protein.
       0.890
EFL23572.1
2-keto-3-deoxygluconate kinase.
 
     0.844
EFL28291.1
IclR family transcriptional regulator; Truncated CDS; unextendable partial coding region.
  
     0.772
EFL23575.1
N-acyl-D-amino acid deacylase.
       0.605
EFL23569.1
Gluconate transporter.
       0.517
EFL24868.1
Allophanate hydrolase, subunit 1.
  
    0.478
EFL27871.1
Putative allophanate hydrolase subunit 1 family protein.
  
    0.478
EFL23573.1
Transposase, OrfB family protein.
       0.460
EFL23574.1
Putative D-amino acid deaminase.
       0.428
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.