STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23574.1Putative D-amino acid deaminase. (332 aa)    
Predicted Functional Partners:
EFL23575.1
N-acyl-D-amino acid deacylase.
 
   
 0.826
EFL20464.1
OmpA/MotB.
  
    0.638
EFL22318.1
Pyruvate dehydrogenase (cytochrome); Belongs to the TPP enzyme family.
  
    0.638
EFL22492.1
Putative pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
    0.638
EFL25587.1
Putative basic proline-rich protein.
  
    0.638
EFL29324.1
Pyruvate dehydrogenase (cytochrome); Belongs to the TPP enzyme family.
  
    0.638
EFL22997.1
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
  0.630
EFL27606.1
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
  0.630
EFL20395.1
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
   
 
  0.626
EFL23055.1
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
   
 
  0.626
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.