STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23615.1Putative membrane protein. (365 aa)    
Predicted Functional Partners:
EFL25240.1
Putative PAS fold protein; Unextendable partial coding region.
  
  
  0.881
EFL23898.1
Putative tetratricopeptide repeat protein.
   
 0.849
EFL24780.1
Hypothetical protein.
  
 0.833
EFL22809.1
Sensor histidine kinase/response regulator.
    
 0.805
EFL23614.1
Cystathionine gamma-synthase.
       0.780
EFL27779.1
Putative PAS fold protein.
 
  
  0.777
EFL23359.1
Putative tetratricopeptide repeat protein.
 
 
 0.776
EFL23167.1
Large Ala/Glu-rich protein.
  
     0.762
EFL25861.1
Putative M6 family metalloprotease domain protein.
 
     0.757
EFL27138.1
Sensor histidine kinase/response regulator.
    
 0.749
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.