STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23618.1Putative aminoglycoside phosphotransferase. (304 aa)    
Predicted Functional Partners:
EFL27376.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.772
EFL24217.1
Tetratricopeptide TPR_2.
  
     0.681
EFL25531.1
Cystathionine beta-synthase.
    
  0.679
sti
Protease inhibitor SIL-V2; Strong inhibitor of bacterial serine proteases such as subtilisin.
  
     0.663
EFL27292.1
Conserved hypothetical protein.
  
    0.641
EFL25541.1
Putative regulatory protein.
  
     0.582
EFL22809.1
Sensor histidine kinase/response regulator.
  
 
 0.581
EFL27138.1
Sensor histidine kinase/response regulator.
   
 
 0.568
EFL26547.1
Superoxide dismutase, copper/zinc binding.
  
     0.559
EFL27291.1
Putative beta-xylosidase.
  
     0.546
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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