STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23624.1Putative transposase. (179 aa)    
Predicted Functional Partners:
EFL23623.1
Putative transposase; Truncated CDS.
 
     0.946
EFL27544.1
Putative transposase.
 
    0.783
EFL27512.1
Putative transposase.
 
    0.782
EFL20367.1
Putative transposase.
  
     0.774
EFL24485.1
Putative transposase.
  
     0.774
EFL27510.1
Putative transposase.
  
     0.773
EFL21958.1
Conserved hypothetical protein.
 
 
 0.725
EFL22994.1
Conserved hypothetical protein.
  
     0.654
EFL25269.1
Conserved hypothetical protein.
  
     0.648
EFL24981.1
Putative integrase; Belongs to the 'phage' integrase family.
  
     0.624
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.