STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23627.1ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, periplasmic sugar-binding protein. (356 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
   
 0.965
EFL22381.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.956
EFL28032.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.954
EFL27138.1
Sensor histidine kinase/response regulator.
   
 0.947
EFL21336.1
Ribose import ATP-binding protein RbsA 2.
 
 0.921
EFL27366.1
Ribose import ATP-binding protein RbsA 2.
 
 0.917
EFL21337.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.906
EFL27367.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.906
rbsD
Cytoplasmic D-ribose-binding protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.896
rbsA-2
Ribose import ATP-binding protein RbsA 1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.891
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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