STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23632.1Putative transcriptional regulator. (231 aa)    
Predicted Functional Partners:
EFL23631.1
Putative cupin domain protein.
       0.615
EFL20434.1
Conserved hypothetical protein.
  
     0.554
EFL24819.1
Putative TetR-family transcriptional regulator.
  
     0.530
EFL22660.1
Putative monooxygenase; Unextendable partial coding region.
  
     0.526
EFL20725.1
Tetracycline repressor protein class D.
  
     0.507
EFL23001.1
Pas:ggdef.
  
  
 0.502
EFL29302.1
TetR family transcriptional regulator.
  
     0.482
EFL21745.1
Sensory box/GGDEF family protein.
  
    0.478
EFL25860.1
Developmental regulator MorA.
  
    0.478
EFL22278.1
Conserved hypothetical protein.
  
     0.434
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.