STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23654.1LigA protein. (490 aa)    
Predicted Functional Partners:
EFL28329.1
Conserved hypothetical protein.
  
     0.726
EFL20520.1
Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
       0.605
EFL23653.1
Conserved hypothetical protein.
       0.570
EFL29430.1
Conserved hypothetical protein.
  
     0.560
EFL29118.1
Conserved hypothetical protein.
  
     0.557
EFL25923.1
PE-PGRS family protein.
  
     0.528
EFL20657.1
GNAT family acetyltransferase.
  
     0.484
EFL20821.1
Putative transcriptional regulator, LuxR family.
  
    0.474
EFL25964.1
Nipsnap superfamily protein.
  
     0.468
EFL20819.1
Putative transcriptional regulator, LuxR family.
  
     0.462
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.