STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23676.1Putative transcriptional regulator. (354 aa)    
Predicted Functional Partners:
EFL24901.1
DNA polymerase III, subunits gamma and tau.
   
 0.981
EFL24992.1
DNA polymerase III, delta' subunit.
  
 0.976
EFL26955.1
DNA polymerase I.
  
 0.972
EFL26957.1
DNA polymerase I.
  
 0.972
EFL26170.1
DNA polymerase III, delta subunit.
   
 0.968
EFL24676.1
DnaA protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.
  
 
 0.966
EFL23677.1
Conserved hypothetical protein.
 
     0.965
EFL23393.1
Putative ATP-dependent DNA helicase PcrA.
  
 0.932
EFL22809.1
Sensor histidine kinase/response regulator.
  
 0.930
EFL25369.1
DNA polymerase III, alpha subunit.
    
 0.912
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.