STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23680.1ABC lipoprotein transporter, permease component. (856 aa)    
Predicted Functional Partners:
EFL23681.1
Putative ABC transporter, ATP-binding protein.
 
 0.988
EFL25524.1
Putative ABC transporter, ATP-binding protein.
 
 0.949
EFL21119.1
Putative ABC transporter, ATP-binding protein.
 
 0.948
EFL22541.1
Putative ABC transporter, ATP-binding protein; Truncated CDS; unextendable partial coding region.
 
 0.936
EFL21627.1
Putative ABC transporter, ATP-binding protein.
 
 0.915
EFL28400.1
Putative ABC transporter, ATP-binding protein.
 
 0.914
EFL26122.1
Putative ABC transporter, ATP-binding protein.
 
 0.904
EFL28615.1
Putative ABC transporter, ATP-binding protein.
 
 0.897
EFL21564.1
Macrolide-specific ABC-type efflux carrier MacB.
 
 0.817
EFL22892.1
Putative ABC transporter, ATP binding protein.
 
 0.816
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.