STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23681.1Putative ABC transporter, ATP-binding protein. (262 aa)    
Predicted Functional Partners:
EFL24456.1
Putative ABC transport system integral membrane protein.
 
 0.991
EFL23680.1
ABC lipoprotein transporter, permease component.
 
 0.985
EFL28396.1
Putative ABC transporter integral membrane protein.
 
 0.931
EFL25523.1
Putative ABC transporter integral membrane protein.
 
 
 0.843
EFL21628.1
Putative ABC transporter integral membrane protein.
 
 0.833
EFL21566.1
Efflux ABC transporter, permease.
 
 0.779
EFL21565.1
Efflux ABC transporter, permease.
 
 0.768
EFL22542.1
Putative ABC transport system integral membrane protein.
 
 
 0.734
EFL24130.1
Putative membrane protein.
   
 
 0.647
EFL22540.1
PE-PGRS family protein.
 
 
 0.644
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.