STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23683.1Putative cellulose-binding protein. (311 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
   
 0.904
EFL27138.1
Sensor histidine kinase/response regulator.
   
 0.791
EFL25240.1
Putative PAS fold protein; Unextendable partial coding region.
  
 
  0.760
EFL24341.1
Putative integral membrane protein.
  
 
   0.756
EFL26159.1
Putative membrane protein.
  
     0.751
EFL22874.1
Putative ATP/GTP-binding protein.
 
     0.742
EFL23684.1
Conserved hypothetical protein.
       0.739
EFL23167.1
Large Ala/Glu-rich protein.
  
     0.737
EFL25165.1
Putative GAF domain protein.
  
  
  0.733
EFL24645.1
Conserved hypothetical protein.
  
     0.728
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.