STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23686.1SMI1/KNR4 family protein; Truncated CDS; unextendable partial coding region. (211 aa)    
Predicted Functional Partners:
EFL23687.1
Conserved hypothetical protein.
     
 0.798
EFL23688.1
Conserved hypothetical protein.
       0.797
EFL23685.1
Putative basic proline-rich protein.
       0.793
EFL23684.1
Conserved hypothetical protein.
       0.605
EFL20835.1
Putative FtsK/SpoIIIE family protein.
   
 
 0.583
EFL21721.1
Putative membrane protein.
   
 
 0.583
EFL22807.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.583
EFL22833.1
FtsK/SpoIIIE family protein; Truncated CDS; unextendable partial coding region.
   
 
 0.583
EFL24996.1
FtsK/SpoIIIE family protein.
   
 
 0.583
EFL25642.1
Putative FtsK/SpoIIIE family protein.
   
 
 0.583
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.