STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23687.1Conserved hypothetical protein. (184 aa)    
Predicted Functional Partners:
EFL23688.1
Conserved hypothetical protein.
       0.890
EFL23686.1
SMI1/KNR4 family protein; Truncated CDS; unextendable partial coding region.
     
 0.798
EFL23057.1
Conserved hypothetical protein.
  
 
 0.645
EFL23685.1
Putative basic proline-rich protein.
       0.557
EFL23683.1
Putative cellulose-binding protein.
  
 
 0.522
EFL22596.1
AP endonuclease, family 2.
   
    0.459
EFL22832.1
Putative integral membrane protein.
   
    0.445
EFL24998.1
Secretion protein Snm4.
   
    0.445
EFL29214.1
Secretion protein Snm4.
   
    0.445
EFL23684.1
Conserved hypothetical protein.
       0.434
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.