STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23709.1Putative secreted protein. (599 aa)    
Predicted Functional Partners:
EFL23710.1
Putative ABC transporter, ATP-binding protein.
  
    0.759
EFL23708.1
Putative two-component system response regulator.
       0.757
EFL22543.1
Putative radical SAM domain protein; Overlaps another CDS with the same product name.
  
     0.748
EFL22684.1
Putative BldA-regulated nucleotide binding protein.
  
     0.747
EFL25412.1
Conserved hypothetical protein.
  
     0.736
ispE
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
  
    0.732
EFL26546.1
Putative integral membrane protein; Truncated CDS.
  
     0.702
EFL23776.1
Putative secreted protein.
  
     0.698
EFL26320.1
Conserved hypothetical protein.
  
     0.691
EFL22553.1
Basic proline-rich protein.
  
     0.686
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.