STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23717.1Putative dolichyl-phosphate-mannose-protein mannosyltransferase family protein. (596 aa)    
Predicted Functional Partners:
rsmI
Tetrapyrrole methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.804
EFL24671.1
In RecF-GyrB intergenic region; Belongs to the UPF0232 family.
  
     0.749
EFL23714.1
TatD family hydrolase.
 
     0.743
EFL23713.1
Conserved hypothetical protein.
     
 0.739
EFL26867.1
Putative integral membrane protein.
  
     0.737
EFL23715.1
Conserved hypothetical protein.
       0.727
EFL22716.1
Conserved hypothetical protein.
  
     0.699
EFL26444.1
Conserved hypothetical protein.
  
     0.689
EFL24189.1
Cytochrome c biogenesis membrane protein.
  
     0.688
EFL24925.1
Ser/Thr protein phosphatase.
  
     0.688
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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