STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23731.1Beta-lactamase. (396 aa)    
Predicted Functional Partners:
guaA
GMP synthase (Glutamine amidotransferase); Catalyzes the synthesis of GMP from XMP.
     
 0.650
EFL23732.1
Cobalt ABC transporter, ATP-binding protein.
       0.610
EFL23733.1
Cobalt ABC transporter, permease CbiQ.
       0.610
EFL23734.1
Putative membrane protein.
       0.610
EFL27497.1
Haloalkane dehalogenase; Truncated CDS; unextendable partial coding region.
  
  
 0.567
EFL23125.1
Beta-lactamase.
  
     0.463
EFL23730.1
PE-PGRS family protein.
       0.437
EFL21148.1
Putative penicillin-binding protein 4 (PBP-4).
  
     0.434
EFL23923.1
Putative D-aminoacylase.
 
     0.427
EFL23971.1
Beta-lactamase.
  
     0.409
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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