STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23734.1Putative membrane protein. (388 aa)    
Predicted Functional Partners:
EFL23732.1
Cobalt ABC transporter, ATP-binding protein.
 
 0.999
EFL23733.1
Cobalt ABC transporter, permease CbiQ.
 
 0.999
EFL26556.1
Putative integral membrane protein.
  
 0.984
EFL27120.1
CbiG protein/precorrin-3B C17-methyltransferase.
  
  
 0.941
EFL20703.1
Precorrin-6x reductase CbiJ/CobK.
  
  
 0.880
EFL20702.1
precorrin-3B C(17)-methyltransferase; Truncated CDS; unextendable partial coding region.
 
  
 0.826
EFL21918.1
Putative methyltransferase.
 
 
 0.707
EFL21916.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.693
EFL20704.1
Cobalamin biosynthesis protein CbiD.
  
 
 0.682
EFL20706.1
precorrin-6Y C(5,15)-methyltransferase [decarboxylating] (Precorrin-6 methyltransferase) (Precorrin-6Y methylase).
  
 
 0.669
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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