STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23755.1Penicillin amidase; Unextendable partial coding region. (916 aa)    
Predicted Functional Partners:
EFL28071.1
Putative acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase subfamily.
     
  0.855
EFL23756.1
Sodium/hydrogen exchanger family protein.
       0.751
EFL26628.1
Beta lactamase.
     
  0.706
EFL26629.1
Beta-lactamase.
     
  0.706
EFL27087.1
Beta-lactamase regulatory protein BlaB.
     
  0.706
EFL27089.1
Beta-lactamase.
     
  0.706
EFL23757.1
Type I antifreeze protein; Unextendable partial coding region.
       0.694
EFL21630.1
Non-ribosomal peptide synthetase.
  
  
 0.687
EFL23758.1
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
       0.655
EFL21634.1
Non-ribosomal peptide synthetase/polyketide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.560
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.