STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23774.1Putative TetR-family transcriptional regulator. (160 aa)    
Predicted Functional Partners:
EFL23776.1
Putative secreted protein.
 
     0.712
EFL22874.1
Putative ATP/GTP-binding protein.
  
     0.662
EFL25249.1
Putative sporulation associated protein.
  
     0.559
EFL26681.1
Conserved hypothetical protein.
  
     0.556
EFL23773.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
     0.545
EFL24664.1
Putative DNA-binding protein.
  
     0.545
EFL22602.1
Pca regulon regulatory protein PcaR.
       0.539
EFL21446.1
Putative regulatory protein.
  
     0.533
EFL22928.1
Putative regulatory protein; Truncated CDS.
  
     0.528
EFL23775.1
Hypothetical protein.
       0.524
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.