STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23776.1Putative secreted protein. (416 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
  
  
 0.981
EFL26687.1
Conserved hypothetical protein.
  
 
 0.928
EFL25240.1
Putative PAS fold protein; Unextendable partial coding region.
 
  
 0.924
EFL27138.1
Sensor histidine kinase/response regulator.
  
  
 0.834
EFL21288.1
Putative sensory box histidine kinase.
  
  
 0.775
EFL27779.1
Putative PAS fold protein.
  
  
 0.775
EFL22543.1
Putative radical SAM domain protein; Overlaps another CDS with the same product name.
  
   
 0.750
EFL25259.1
Putative regulatory protein.
  
     0.740
EFL22400.1
Collagen alpha-1(III) chain.
 
     0.732
EFL23774.1
Putative TetR-family transcriptional regulator.
 
     0.712
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.