STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23776.1Putative secreted protein. (416 aa)    
Predicted Functional Partners:
EFL22809.1
Sensor histidine kinase/response regulator.
  
  
 0.990
EFL25240.1
Putative PAS fold protein; Unextendable partial coding region.
 
    0.934
EFL27138.1
Sensor histidine kinase/response regulator.
  
  
 0.922
EFL26687.1
Conserved hypothetical protein.
  
 
 0.912
EFL21288.1
Putative sensory box histidine kinase.
  
    0.805
EFL27779.1
Putative PAS fold protein.
  
    0.805
EFL27778.1
Putative glucosyltransferase.
  
  
 0.755
EFL22543.1
Putative radical SAM domain protein; Overlaps another CDS with the same product name.
  
     0.750
EFL25259.1
Putative regulatory protein.
  
     0.740
EFL23774.1
Putative TetR-family transcriptional regulator.
 
     0.737
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.