STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23777.1TetR-family transcriptional regulator. (208 aa)    
Predicted Functional Partners:
EFL23778.1
Hypothetical protein.
       0.813
EFL23779.1
Small hydrophobic membrane protein.
       0.813
EFL23039.1
Cysteine desulfurase; Truncated CDS; unextendable partial coding region.
    
  0.670
EFL23780.1
Oxidoreductase alpha subunit.
    
 0.447
EFL23040.1
Alpha/beta hydrolase.
 
     0.436
EFL27990.1
Strictosidine synthase.
  
     0.425
EFL23782.1
Putative iron-sulfur oxidoreductase.
  
    0.416
EFL23742.1
Regulatory protein, MerR.
  
     0.413
EFL23781.1
Conserved hypothetical protein.
       0.412
EFL22081.1
Fatty oxidation complex, alpha subunit.
 
     0.408
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.