STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23780.1Oxidoreductase alpha subunit. (367 aa)    
Predicted Functional Partners:
EFL23782.1
Putative iron-sulfur oxidoreductase.
 
 
 0.950
EFL23781.1
Conserved hypothetical protein.
       0.882
EFL28296.1
Ring hydroxylating beta subunit family protein.
 
 0.866
EFL21194.1
Biphenyl 2,3-dioxygenase, beta subunit.
 
 0.864
EFL29030.1
Benzoate 1,2-dioxygenase, small subunit.
  
 0.831
EFL29237.1
Phenoxybenzoate dioxygenase beta subunit.
 
 
 0.800
EFL26378.1
Putative iron-sulfur oxidoreductase.
 
 
 0.773
EFL28077.1
Putative iron-sulfur oxidoreductase.
 
 
 0.770
EFL28297.1
Vanillate O-demethylase oxidoreductase.
 
 
 0.761
EFL29247.1
Vanillate O-demethylase oxidoreductase.
 
 
 0.761
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.