STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23784.1Iron-chelator utilization protein. (295 aa)    
Predicted Functional Partners:
EFL23783.1
Iron-siderophore uptake ABC system substrate-binding component.
 
  
 0.897
EFL22260.1
Isochorismatase.
 
  
 0.893
EFL23788.1
Putative siderophore synthetase component.
     
 0.819
EFL23787.1
Putative acetyltransferase.
  
    0.743
EFL25231.1
Conserved hypothetical protein; Unextendable partial coding region.
   
  0.735
EFL25797.1
Lantibiotic transporter.
   
  0.735
EFL28419.1
ABC transporter, transmembrane region.
   
  0.735
EFL28420.1
ABC transporter, transmembrane region.
   
  0.735
EFL28421.1
ABC transporter, transmembrane region.
   
  0.735
EFL21630.1
Non-ribosomal peptide synthetase.
  
  
 0.642
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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