STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23789.1Conserved hypothetical protein. (419 aa)    
Predicted Functional Partners:
EFL23791.1
PE-PGRS family protein.
 
     0.719
EFL27297.1
Putative secreted hydrolase.
  
  
 0.683
EFL23790.1
Putative lipase; Truncated CDS; unextendable partial coding region.
 
     0.629
EFL22029.1
Chitinase.
     
 0.594
EFL20298.1
phytanoyl-CoA dioxygenase (PhyH) superfamily protein.
  
     0.585
EFL27979.1
Conserved hypothetical protein.
  
     0.545
EFL28588.1
Conserved hypothetical protein.
  
     0.537
EFL26282.1
Glycosyl hydrolase family 10.
    
 0.536
EFL26727.1
Pullulanase (Alpha-dextrin endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase).
   
 
 0.531
EFL28791.1
Conserved hypothetical protein.
  
     0.514
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.