STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23790.1Putative lipase; Truncated CDS; unextendable partial coding region. (287 aa)    
Predicted Functional Partners:
EFL23791.1
PE-PGRS family protein.
 
     0.788
EFL23789.1
Conserved hypothetical protein.
 
     0.629
EFL27480.1
Conserved hypothetical protein.
  
    0.471
EFL21560.1
Monooxygenase, FAD-binding.
  
     0.462
EFL21366.1
Putative secreted protein.
  
    0.446
EFL24494.1
Putative Hsp18 transcriptional regulator.
  
     0.445
EFL23512.1
LigA protein.
  
     0.444
EFL22046.1
LigA protein; Belongs to the serpin family.
  
     0.443
EFL21262.1
PE-PGRS family protein.
  
     0.439
EFL20414.1
Putative glycosyl hydrolase.
  
     0.418
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.