STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23791.1PE-PGRS family protein. (231 aa)    
Predicted Functional Partners:
EFL23790.1
Putative lipase; Truncated CDS; unextendable partial coding region.
 
     0.788
EFL23789.1
Conserved hypothetical protein.
 
     0.719
EFL20298.1
phytanoyl-CoA dioxygenase (PhyH) superfamily protein.
  
     0.597
EFL29345.1
Hypothetical protein.
  
   
 0.585
EFL24804.1
Conserved hypothetical protein.
  
     0.577
EFL25758.1
GNAT family acetyltransferase.
  
     0.463
EFL27930.1
Putative transcriptional regulator.
  
    0.457
EFL20297.1
AraC family transcriptional regulator.
  
    0.456
EFL25870.1
Putative glycosyltransferase.
  
     0.443
EFL24710.1
Putative transcriptional regulator protein, ArsR family.
  
     0.426
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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