Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23799.1Conserved hypothetical protein. (431 aa)    
Predicted Functional Partners:
EFL23798.1
Iron-dependent peroxidase.
 
     0.930
EFL23801.1
Putative LigA.
 
     0.787
EFL27673.1
LigA protein.
     
  0.645
EFL28327.1
Putative 4-hydroxyphenylpyruvate dioxygenase; Truncated CDS; unextendable partial coding region.
     
  0.645
EFL20818.1
Putative LuxR-family transcriptional regulator.
  
     0.642
EFL28874.1
Putative LuxR-family transcriptional regulator.
  
     0.635
EFL20665.1
Putative LuxR-family transcriptional regulator.
  
     0.593
EFL22557.1
Conserved hypothetical protein.
  
     0.565
EFL28418.1
Putative membrane protein.
  
 
 0.557
EFL25739.1
Conserved hypothetical protein.
  
     0.523
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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