STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23804.1Abortive infection protein. (281 aa)    
Predicted Functional Partners:
EFL23803.1
Putative sensor kinase.
 
     0.963
EFL23802.1
Response regulator, two-component system.
 
     0.913
EFL25865.1
Fatty acid binding protein.
  
  
 0.721
EFL27188.1
ABC transporter, ATP-binding protein.
  
 
 0.569
EFL28900.1
ABC transporter, ATP-binding protein.
  
 
 0.569
EFL26638.1
TetR family transcriptional regulator.
  
     0.512
EFL23805.1
2,2-dialkylglycine decarboxylase (pyruvate); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.486
hmtR
Putative transporter.
  
    0.473
EFL21742.1
Putative large secreted protein.
  
     0.436
EFL28399.1
Putative integral membrane.
  
     0.419
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.