STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23805.12,2-dialkylglycine decarboxylase (pyruvate); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (443 aa)    
Predicted Functional Partners:
EFL25055.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 0.929
EFL26011.1
Methylmalonate-semialdehyde dehydrogenase (acylating).
  
 0.917
EFL22397.1
Aminotransferase class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.912
EFL25473.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.910
EFL22398.1
Hydrolase.
  
 
 0.908
EFL22401.1
Gamma-glutamyltransferase.
  
 
 0.891
EFL23651.1
Putative gamma-glutamyltranspeptidase.
  
 
 0.891
panC
Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.889
EFL23806.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.861
EFL26572.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.834
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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