STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23806.1LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (307 aa)    
Predicted Functional Partners:
EFL23805.1
2,2-dialkylglycine decarboxylase (pyruvate); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.861
EFL29055.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.757
EFL24549.1
LysR family transcriptional regulator.
  
     0.752
EFL26425.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.752
EFL21595.1
Transcriptional regulator LysR family protein; Belongs to the LysR transcriptional regulatory family.
  
     0.736
EFL23321.1
Small neutral protease regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.722
EFL27068.1
Isoleucine biosynthesis transcriptional activator IlvR; Belongs to the LysR transcriptional regulatory family.
  
     0.702
EFL21575.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.693
EFL20748.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.686
EFL28097.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.677
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.