Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL23824.1Putative regulatory protein. (165 aa)    
Predicted Functional Partners:
EFL24357.1
Conserved hypothetical protein.
 
  0.849
EFL22809.1
Sensor histidine kinase/response regulator.
  
 
 0.824
EFL24265.1
Putative regulatory protein.
  
   0.801
EFL25047.1
Putative regulator.
  
   0.796
EFL21503.1
Collagen alpha-1(I) chain (Alpha-1 type I collagen).
  
   0.794
EFL23324.1
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
  0.775
EFL26708.1
DNA-directed RNA polymerase II subunit RPB1 (RNApolymerase II subunit B1) (DNA-directed RNA polymerase III largestsubunit).
  
   0.775
EFL23988.1
Conserved hypothetical protein.
  
   0.774
EFL24590.1
Putative regulatory protein.
  
     0.773
EFL22481.1
Putative regulatory protein.
  
  
  0.758
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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