Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL23825.1Xre family toxin-antitoxin system, antitoxin component. (255 aa)    
Predicted Functional Partners:
rpmC
Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
   
 
 0.811
EFL24957.1
Putative toxin-antitoxin system, toxin component.
  
     0.773
EFL28863.1
Putative toxin-antitoxin system, toxin component.
  
     0.771
EFL25045.1
Putative toxin-antitoxin system, toxin component.
  
     0.770
EFL28174.1
Conserved hypothetical protein.
  
     0.770
EFL21057.1
Conserved hypothetical protein.
  
     0.768
rpsS
Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
   0.768
EFL28434.1
Conserved hypothetical protein.
  
     0.768
EFL20856.1
Methyltransferase domain protein.
  
     0.767
EFL25211.1
Conserved hypothetical protein.
  
     0.767
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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