STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23825.1Xre family toxin-antitoxin system, antitoxin component. (255 aa)    
Predicted Functional Partners:
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.858
EFL24957.1
Putative toxin-antitoxin system, toxin component.
  
     0.773
EFL28863.1
Putative toxin-antitoxin system, toxin component.
  
     0.771
EFL23886.1
Putative toxin-antitoxin system, toxin component.
 
     0.770
EFL25045.1
Putative toxin-antitoxin system, toxin component.
  
     0.770
EFL28174.1
Conserved hypothetical protein.
  
     0.770
EFL21057.1
Conserved hypothetical protein.
  
     0.768
EFL28434.1
Conserved hypothetical protein.
  
     0.768
EFL20856.1
Methyltransferase domain protein.
  
     0.767
EFL25211.1
Conserved hypothetical protein.
  
     0.767
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.