Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL23839.1Conserved hypothetical protein; Truncated CDS; unextendable partial coding region. (446 aa)    
Predicted Functional Partners:
EFL23838.1
Putative tail lysozyme; Unextendable partial coding region.
 
  
 0.958
EFL23841.1
Putative phage tail protein (CHP2241_phage).
 
  
 0.957
EFL23840.1
Putative LysM domain protein.
 
  
 0.953
EFL23837.1
Conserved hypothetical protein.
 
   
 0.897
EFL29126.1
Conserved hypothetical protein.
 
  
 0.837
EFL29121.1
Conserved hypothetical phage tail region protein.
 
  
 0.826
EFL29128.1
Putative tail lysozyme.
 
  
 0.825
EFL29123.1
Conserved hypothetical phage tail region protein.
 
  
 0.818
EFL23846.1
Phage tail sheath protein; Truncated CDS; unextendable partial coding region.
 
   
 0.815
EFL29120.1
Phage tail sheath protein.
 
   
 0.813
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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