STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23839.1Conserved hypothetical protein; Truncated CDS; unextendable partial coding region. (446 aa)    
Predicted Functional Partners:
EFL23838.1
Putative tail lysozyme; Unextendable partial coding region.
 
  
 0.957
EFL23841.1
Putative phage tail protein (CHP2241_phage).
 
  
 0.956
EFL23840.1
Putative LysM domain protein.
 
    0.952
EFL23837.1
Conserved hypothetical protein.
 
   
 0.900
EFL29126.1
Conserved hypothetical protein.
 
  
 0.843
EFL23844.1
Putative secreted protein.
 
   
 0.834
EFL29121.1
Conserved hypothetical phage tail region protein.
 
  
 0.826
EFL23846.1
Phage tail sheath protein; Truncated CDS; unextendable partial coding region.
 
   
 0.825
EFL29120.1
Phage tail sheath protein.
 
   
 0.824
EFL29122.1
Putative phage tail sheath protein.
 
   
 0.821
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.