STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23843.1Conserved hypothetical protein. (74 aa)    
Predicted Functional Partners:
EFL23844.1
Putative secreted protein.
 
     0.973
EFL23845.1
Putative phage tail protein (CHP2241_phage).
 
     0.972
EFL23846.1
Phage tail sheath protein; Truncated CDS; unextendable partial coding region.
 
     0.899
EFL23848.1
Putative hydrolytic protein.
 
     0.825
EFL23851.1
Conserved hypothetical protein.
 
     0.805
EFL23837.1
Conserved hypothetical protein.
 
     0.802
EFL23840.1
Putative LysM domain protein.
 
     0.801
EFL23841.1
Putative phage tail protein (CHP2241_phage).
 
     0.797
EFL23839.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
 
     0.795
EFL20344.1
Putative hydrolytic protein.
 
     0.774
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.