STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23846.1Phage tail sheath protein; Truncated CDS; unextendable partial coding region. (345 aa)    
Predicted Functional Partners:
EFL29126.1
Conserved hypothetical protein.
 
 
 0.990
EFL23838.1
Putative tail lysozyme; Unextendable partial coding region.
 
 
 0.983
EFL29128.1
Putative tail lysozyme.
 
 
 0.983
EFL29131.1
NHL repeat domain protein.
 
 
 0.983
EFL23840.1
Putative LysM domain protein.
 
 
 0.958
EFL29125.1
Peptidoglycan-binding LysM.
 
 
 0.958
EFL23837.1
Conserved hypothetical protein.
 
 
 0.951
EFL29129.1
Basic proline-rich protein.
 
 
 0.951
EFL29130.1
Putative LigA.
 
 
 0.951
EFL29121.1
Conserved hypothetical phage tail region protein.
 
 
 0.944
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.