STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23849.1AAA family ATPase. (316 aa)    
Predicted Functional Partners:
EFL23850.1
Putative AAA family ATPase.
     0.958
EFL23898.1
Putative tetratricopeptide repeat protein.
   
 0.876
EFL23846.1
Phage tail sheath protein; Truncated CDS; unextendable partial coding region.
     0.864
EFL24562.1
Putative membrane protein.
   
 0.855
EFL24232.1
Acetoin utilization protein AcuC.
   
 0.841
EFL23851.1
Conserved hypothetical protein.
 
     0.831
EFL28265.1
Putative LigA.
    
 0.828
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.809
EFL29121.1
Conserved hypothetical phage tail region protein.
 
     0.796
EFL23838.1
Putative tail lysozyme; Unextendable partial coding region.
 
     0.791
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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