STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL23850.1Putative AAA family ATPase. (311 aa)    
Predicted Functional Partners:
EFL23849.1
AAA family ATPase.
     0.958
EFL23851.1
Conserved hypothetical protein.
 
     0.883
EFL23898.1
Putative tetratricopeptide repeat protein.
   
 0.876
EFL24562.1
Putative membrane protein.
   
 0.855
EFL24173.1
AAA family ATPase.
 
  0.847
EFL24232.1
Acetoin utilization protein AcuC.
   
 0.841
EFL28265.1
Putative LigA.
    
 0.828
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.809
EFL23844.1
Putative secreted protein.
 
     0.791
EFL23840.1
Putative LysM domain protein.
 
   
 0.790
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.