Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL23851.1Conserved hypothetical protein. (215 aa)    
Predicted Functional Partners:
EFL23846.1
Phage tail sheath protein; Truncated CDS; unextendable partial coding region.
 
 
 
 0.949
EFL23841.1
Putative phage tail protein (CHP2241_phage).
 
 
   0.947
EFL29120.1
Phage tail sheath protein.
 
 
 
 0.941
EFL29122.1
Putative phage tail sheath protein.
 
 
 
 0.935
EFL29123.1
Conserved hypothetical phage tail region protein.
 
 
   0.935
EFL29121.1
Conserved hypothetical phage tail region protein.
 
 
   0.927
EFL23852.1
Putative response regulator.
 
     0.918
EFL23850.1
Putative AAA family ATPase.
 
     0.883
EFL23844.1
Putative secreted protein.
 
     0.851
EFL23849.1
AAA family ATPase.
 
     0.831
Your Current Organism:
Streptomyces himastatinicus
NCBI taxonomy Id: 457427
Other names: S. himastatinicus ATCC 53653, Streptomyces himastatinicus ATCC 53653, Streptomyces himastatinicus str. ATCC 53653, Streptomyces himastatinicus strain ATCC 53653, Streptomyces hygroscopicus ATCC 53653
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